HL_8FLB_018

3D structure

PDB id

8FLB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State K2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

CCCGAAGAGGG

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FLB_018 not in the Motif Atlas

Geometric match to HL_4WF9_003

Geometric discrepancy: 0.1812

The information below is about HL_4WF9_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

8FLB|1|L3|C|1250
8FLB|1|L3|C|1251
8FLB|1|L3|C|1252
8FLB|1|L3|G|1253
8FLB|1|L3|A|1254
8FLB|1|L3|A|1255
8FLB|1|L3|G|1256
8FLB|1|L3|A|1257
8FLB|1|L3|G|1258
8FLB|1|L3|G|1259
8FLB|1|L3|G|1260

Current chains

Chain L3

28S rRNA

Nearby chains