HL_8FLB_034

3D structure

PDB id

8FLB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State K2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

CAGUCGAGAGUGGACGGGAGCGGCGCGCGGACGCUACG

Length

38 nucleotides

Bulged bases

8FLB|1|L3|U|2097, 8FLB|1|L3|U|2267, 8FLB|1|L3|C|2269

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FLB|1|L3|C|2087
8FLB|1|L3|A|2088
8FLB|1|L3|G|2089
8FLB|1|L3|U|2090
8FLB|1|L3|C|2091
8FLB|1|L3|G|2092
8FLB|1|L3|A|2093
8FLB|1|L3|G|2094
8FLB|1|L3|A|2095
8FLB|1|L3|G|2096
8FLB|1|L3|U|2097
8FLB|1|L3|G|2098
8FLB|1|L3|G|2099
8FLB|1|L3|A|2100
8FLB|1|L3|C|2101
8FLB|1|L3|G|2102
8FLB|1|L3|G|2103
8FLB|1|L3|G|2104
8FLB|1|L3|A|2105
8FLB|1|L3|G|2106
8FLB|1|L3|C|2107
8FLB|1|L3|G|2108
8FLB|1|L3|G|2109
8FLB|1|L3|C|2110
8FLB|1|L3|G|2111
8FLB|1|L3|C|2258
8FLB|1|L3|G|2259
8FLB|1|L3|C|2260
8FLB|1|L3|G|2261
8FLB|1|L3|G|2262
8FLB|1|L3|A|2263
8FLB|1|L3|C|2264
8FLB|1|L3|G|2265
8FLB|1|L3|C|2266
8FLB|1|L3|U|2267
8FLB|1|L3|A|2268
8FLB|1|L3|C|2269
8FLB|1|L3|G|2270

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LB

60S ribosomal protein L18

Chain LL

60S ribosomal protein L28

Chain LM

60S ribosomal protein L29

Chain SA

60S ribosomal protein L4

Chain SC

60S ribosomal protein L6

Chain SD

60S ribosomal protein L7