HL_8FLC_035

3D structure

PDB id

8FLC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State K3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

CGCGGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FLC_035 not in the Motif Atlas

Homologous match to HL_8C3A_030

Geometric discrepancy: 0.0876

The information below is about HL_8C3A_030

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

8FLC|1|L3|C|2317
8FLC|1|L3|G|2318
8FLC|1|L3|C|2319
8FLC|1|L3|G|2320
8FLC|1|L3|G|2321
8FLC|1|L3|G|2322

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LL

60S ribosomal protein L28

Chain LQ

60S ribosomal protein L32