HL_8FLD_018

3D structure

PDB id

8FLD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State L1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

CGGACUGUCCCCAGUGCG

Length

18 nucleotides

Bulged bases

8FLD|1|L3|G|1178, 8FLD|1|L3|C|1181

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FLD|1|L3|C|1172
8FLD|1|L3|G|1173
8FLD|1|L3|G|1174
8FLD|1|L3|A|1175
8FLD|1|L3|C|1176
8FLD|1|L3|U|1177
8FLD|1|L3|G|1178
8FLD|1|L3|U|1179
8FLD|1|L3|C|1180
8FLD|1|L3|C|1181
8FLD|1|L3|C|1182
8FLD|1|L3|C|1183
8FLD|1|L3|A|1184
8FLD|1|L3|G|1185
8FLD|1|L3|U|1186
8FLD|1|L3|G|1187
8FLD|1|L3|C|1188
8FLD|1|L3|G|1189

Current chains

Chain L3

28S rRNA

Nearby chains

Chain BE

60S ribosomal protein L10

Chain L4

5S ribosomal RNA; 5S rRNA

Chain SB

60S ribosomal protein L5