HL_8FLD_043

3D structure

PDB id

8FLD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State L1)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.58 Å

Loop

Sequence

AGUUCUCUU(PSU)U

Length

11 nucleotides

Bulged bases

8FLD|1|L3|U|2631

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FLD|1|L3|A|2623
8FLD|1|L3|G|2624
8FLD|1|L3|U|2625
8FLD|1|L3|U|2626
8FLD|1|L3|C|2627
8FLD|1|L3|U|2628
8FLD|1|L3|C|2629
8FLD|1|L3|U|2630
8FLD|1|L3|U|2631
8FLD|1|L3|PSU|2632
8FLD|1|L3|U|2633

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LD

60S ribosomal protein L19

Chain LF

60S ribosomal protein L22

Chain SR

GTP-binding protein 4

Chain SV

Probable ribosome biogenesis protein RLP24