HL_8FLE_017

3D structure

PDB id

8FLE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State L2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

CGGACUGUCCCCAGUGCG

Length

18 nucleotides

Bulged bases

8FLE|1|L3|G|1178, 8FLE|1|L3|C|1181

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FLE|1|L3|C|1172
8FLE|1|L3|G|1173
8FLE|1|L3|G|1174
8FLE|1|L3|A|1175
8FLE|1|L3|C|1176
8FLE|1|L3|U|1177
8FLE|1|L3|G|1178
8FLE|1|L3|U|1179
8FLE|1|L3|C|1180
8FLE|1|L3|C|1181
8FLE|1|L3|C|1182
8FLE|1|L3|C|1183
8FLE|1|L3|A|1184
8FLE|1|L3|G|1185
8FLE|1|L3|U|1186
8FLE|1|L3|G|1187
8FLE|1|L3|C|1188
8FLE|1|L3|G|1189

Current chains

Chain L3

28S rRNA

Nearby chains

Chain BE

60S ribosomal protein L10

Chain L4

5S ribosomal RNA; 5S rRNA

Chain SB

60S ribosomal protein L5