HL_8FLE_032

3D structure

PDB id

8FLE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State L2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

CAGUCGAGAGUGGACGGGAGCGGCGCGCGGACGCUACG

Length

38 nucleotides

Bulged bases

8FLE|1|L3|U|2097, 8FLE|1|L3|U|2267, 8FLE|1|L3|C|2269

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FLE|1|L3|C|2087
8FLE|1|L3|A|2088
8FLE|1|L3|G|2089
8FLE|1|L3|U|2090
8FLE|1|L3|C|2091
8FLE|1|L3|G|2092
8FLE|1|L3|A|2093
8FLE|1|L3|G|2094
8FLE|1|L3|A|2095
8FLE|1|L3|G|2096
8FLE|1|L3|U|2097
8FLE|1|L3|G|2098
8FLE|1|L3|G|2099
8FLE|1|L3|A|2100
8FLE|1|L3|C|2101
8FLE|1|L3|G|2102
8FLE|1|L3|G|2103
8FLE|1|L3|G|2104
8FLE|1|L3|A|2105
8FLE|1|L3|G|2106
8FLE|1|L3|C|2107
8FLE|1|L3|G|2108
8FLE|1|L3|G|2109
8FLE|1|L3|C|2110
8FLE|1|L3|G|2111
8FLE|1|L3|C|2258
8FLE|1|L3|G|2259
8FLE|1|L3|C|2260
8FLE|1|L3|G|2261
8FLE|1|L3|G|2262
8FLE|1|L3|A|2263
8FLE|1|L3|C|2264
8FLE|1|L3|G|2265
8FLE|1|L3|C|2266
8FLE|1|L3|U|2267
8FLE|1|L3|A|2268
8FLE|1|L3|C|2269
8FLE|1|L3|G|2270

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LB

60S ribosomal protein L18

Chain LL

60S ribosomal protein L28

Chain LM

60S ribosomal protein L29

Chain SA

60S ribosomal protein L4

Chain SC

60S ribosomal protein L6

Chain SD

60S ribosomal protein L7