HL_8FLE_040

3D structure

PDB id

8FLE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State L2)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.48 Å

Loop

Sequence

CGCGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FLE_040 not in the Motif Atlas

Geometric match to HL_5TBW_017

Geometric discrepancy: 0.1291

The information below is about HL_5TBW_017

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

8FLE|1|L3|C|2561
8FLE|1|L3|G|2562
8FLE|1|L3|C|2563
8FLE|1|L3|G|2564
8FLE|1|L3|A|2565
8FLE|1|L3|G|2566

Current chains

Chain L3

28S rRNA

Nearby chains