HL_8FLF_032

3D structure

PDB id

8FLF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State L3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

CAGUCGAGAGUGGACGGGAGCGGCGCGCGGACGCUACG

Length

38 nucleotides

Bulged bases

8FLF|1|L3|U|2097, 8FLF|1|L3|U|2267, 8FLF|1|L3|C|2269

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FLF|1|L3|C|2087
8FLF|1|L3|A|2088
8FLF|1|L3|G|2089
8FLF|1|L3|U|2090
8FLF|1|L3|C|2091
8FLF|1|L3|G|2092
8FLF|1|L3|A|2093
8FLF|1|L3|G|2094
8FLF|1|L3|A|2095
8FLF|1|L3|G|2096
8FLF|1|L3|U|2097
8FLF|1|L3|G|2098
8FLF|1|L3|G|2099
8FLF|1|L3|A|2100
8FLF|1|L3|C|2101
8FLF|1|L3|G|2102
8FLF|1|L3|G|2103
8FLF|1|L3|G|2104
8FLF|1|L3|A|2105
8FLF|1|L3|G|2106
8FLF|1|L3|C|2107
8FLF|1|L3|G|2108
8FLF|1|L3|G|2109
8FLF|1|L3|C|2110
8FLF|1|L3|G|2111
8FLF|1|L3|C|2258
8FLF|1|L3|G|2259
8FLF|1|L3|C|2260
8FLF|1|L3|G|2261
8FLF|1|L3|G|2262
8FLF|1|L3|A|2263
8FLF|1|L3|C|2264
8FLF|1|L3|G|2265
8FLF|1|L3|C|2266
8FLF|1|L3|U|2267
8FLF|1|L3|A|2268
8FLF|1|L3|C|2269
8FLF|1|L3|G|2270

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LB

60S ribosomal protein L18

Chain LL

60S ribosomal protein L28

Chain LM

60S ribosomal protein L29

Chain SA

60S ribosomal protein L4

Chain SC

60S ribosomal protein L6

Chain SD

60S ribosomal protein L7