HL_8FLF_075

3D structure

PDB id

8FLF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human nuclear pre-60S ribosomal subunit (State L3)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.65 Å

Loop

Sequence

UCUUG(1MA)AAC(A2M)

Length

10 nucleotides

Bulged bases

8FLF|1|L3|1MA|1322, 8FLF|1|L3|A|1323

QA status

Modified nucleotides: 1MA, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FLF_075 not in the Motif Atlas

Geometric match to HL_8G9Z_001

Geometric discrepancy: 0.1656

The information below is about HL_8G9Z_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.7

Basepair signature

cWW-F

Number of instances in this motif group

22

Unit IDs

8FLF|1|L3|U|1317
8FLF|1|L3|C|1318
8FLF|1|L3|U|1319
8FLF|1|L3|U|1320
8FLF|1|L3|G|1321
8FLF|1|L3|1MA|1322
8FLF|1|L3|A|1323
8FLF|1|L3|A|1324
8FLF|1|L3|C|1325
8FLF|1|L3|A2M|1326

Current chains

Chain L3

28S rRNA

Nearby chains

Chain LK

60S ribosomal protein L27a

Chain LQ

60S ribosomal protein L32