HL_8FOM_005

3D structure

PDB id

8FOM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^Lys(SUU) bound to UAA codon in the ribosomal P site

Experimental method

X-RAY DIFFRACTION

Resolution

3.58 Å

Loop

Sequence

CUUUG

Length

5 nucleotides

Bulged bases

8FOM|1|QA|U|208, 8FOM|1|QA|U|210

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FOM_005 not in the Motif Atlas

Homologous match to HL_4LFB_005

Geometric discrepancy: 0.5923

The information below is about HL_4LFB_005

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.1

Basepair signature

cWW-F

Number of instances in this motif group

37

Unit IDs

8FOM|1|QA|C|201
8FOM|1|QA|U|208
8FOM|1|QA|U|209
8FOM|1|QA|U|210
8FOM|1|QA|G|216

Current chains

Chain QA

16S rRNA

Nearby chains