HL_8FOM_031
3D structure
- PDB id
- 8FOM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^Lys(SUU) bound to UAA codon in the ribosomal P site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.58 Å
Loop
- Sequence
- CUACGG
- Length
- 6 nucleotides
- Bulged bases
- 8FOM|1|QA|U|1450, 8FOM|1|QA|A|1451, 8FOM|1|QA|G|1453
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8FOM_031 not in the Motif Atlas
- Geometric match to HL_6U8D_003
- Geometric discrepancy: 0.278
- The information below is about HL_6U8D_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_32346.4
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 9
Unit IDs
8FOM|1|QA|C|1449
8FOM|1|QA|U|1450
8FOM|1|QA|A|1451
8FOM|1|QA|C|1452
8FOM|1|QA|G|1453
8FOM|1|QA|G|1454
Current chains
- Chain QA
- 16S rRNA
Nearby chains
- Chain QT
- 30S ribosomal protein S20
Coloring options: