HL_8FOM_064

3D structure

PDB id

8FOM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^Lys(SUU) bound to UAA codon in the ribosomal P site

Experimental method

X-RAY DIFFRACTION

Resolution

3.58 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

8FOM|1|RA|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FOM_064 not in the Motif Atlas

Homologous match to HL_5J7L_161

Geometric discrepancy: 0.4093

The information below is about HL_5J7L_161

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

8FOM|1|RA|C|1064
8FOM|1|RA|U|1065
8FOM|1|RA|U|1066
8FOM|1|RA|A|1067
8FOM|1|RA|G|1068
8FOM|1|RA|A|1069
8FOM|1|RA|A|1070
8FOM|1|RA|G|1071
8FOM|1|RA|C|1072
8FOM|1|RA|A|1073
8FOM|1|RA|G|1074

Current chains

Chain RA

23S rRNA

Nearby chains