HL_8FOM_228

3D structure

PDB id

8FOM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^Lys(SUU) bound to UAA codon in the ribosomal P site

Experimental method

X-RAY DIFFRACTION

Resolution

3.58 Å

Loop

Sequence

GCCCACCAGC

Length

10 nucleotides

Bulged bases

8FOM|1|YA|C|886, 8FOM|1|YA|C|888, 8FOM|1|YA|A|890

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FOM|1|YA|G|883
8FOM|1|YA|C|884
8FOM|1|YA|C|885
8FOM|1|YA|C|886
8FOM|1|YA|A|887
8FOM|1|YA|C|888
8FOM|1|YA|C|889
8FOM|1|YA|A|890
8FOM|1|YA|G|892
8FOM|1|YA|C|893

Current chains

Chain YA

23S rRNA

Nearby chains

Chain XM

30S ribosomal protein S13