HL_8FON_018

3D structure

PDB id

8FON (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

GGUCUCC

Length

7 nucleotides

Bulged bases

8FON|1|QA|U|841, 8FON|1|QA|U|843

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FON_018 not in the Motif Atlas

Homologous match to HL_5J7L_018

Geometric discrepancy: 0.4017

The information below is about HL_5J7L_018

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37344.1

Basepair signature

cWW-F-F

Number of instances in this motif group

2

Unit IDs

8FON|1|QA|G|837
8FON|1|QA|G|838
8FON|1|QA|U|841
8FON|1|QA|C|842
8FON|1|QA|U|843
8FON|1|QA|C|848
8FON|1|QA|C|849

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QB

30S ribosomal protein S2

Chain QR

30S ribosomal protein S18