HL_8FON_059

3D structure

PDB id

8FON (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

UGAAAAG

Length

7 nucleotides

Bulged bases

8FON|1|RA|A|781, 8FON|1|RA|A|784

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FON_059 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.3213

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

8FON|1|RA|U|779
8FON|1|RA|G|780
8FON|1|RA|A|781
8FON|1|RA|A|782
8FON|1|RA|A|783
8FON|1|RA|A|784
8FON|1|RA|G|785

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RD

50S ribosomal protein L2