HL_8FON_072

3D structure

PDB id

8FON (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

CAUGGACG

Length

8 nucleotides

Bulged bases

8FON|1|RA|U|1454

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FON_072 not in the Motif Atlas

Geometric match to HL_7RQB_037

Geometric discrepancy: 0.1485

The information below is about HL_7RQB_037

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32426.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

1

Unit IDs

8FON|1|RA|C|1451
8FON|1|RA|A|1453
8FON|1|RA|U|1454
8FON|1|RA|G|1455
8FON|1|RA|G|1456
8FON|1|RA|A|1457
8FON|1|RA|C|1458
8FON|1|RA|G|1459

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RR

50S ribosomal protein L17