HL_8FON_119

3D structure

PDB id

8FON (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

CGACGAG

Length

7 nucleotides

Bulged bases

8FON|1|XA|C|466

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FON_119 not in the Motif Atlas

Homologous match to HL_4LFB_012

Geometric discrepancy: 0.2201

The information below is about HL_4LFB_012

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.3

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

8FON|1|XA|C|458
8FON|1|XA|G|464
8FON|1|XA|A|465
8FON|1|XA|C|466
8FON|1|XA|G|467
8FON|1|XA|A|468
8FON|1|XA|G|474

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XP

30S ribosomal protein S16