HL_8FON_179
3D structure
- PDB id
- 8FON (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.64 Å
Loop
- Sequence
- GUUAAUAUUC
- Length
- 10 nucleotides
- Bulged bases
- 8FON|1|YA|U|1396, 8FON|1|YA|U|1397
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8FON_179 not in the Motif Atlas
- Homologous match to HL_7RQB_036
- Geometric discrepancy: 0.1515
- The information below is about HL_7RQB_036
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_69023.2
- Basepair signature
- cWW-tWH-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
8FON|1|YA|G|1389
8FON|1|YA|U|1390
8FON|1|YA|U|1391
8FON|1|YA|A|1392
8FON|1|YA|A|1393
8FON|1|YA|U|1394
8FON|1|YA|A|1395
8FON|1|YA|U|1396
8FON|1|YA|U|1397
8FON|1|YA|C|1398
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain YX
- 50S ribosomal protein L23
Coloring options: