HL_8FON_211

3D structure

PDB id

8FON (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of tRNA^Lys(SUU) bound to AUA codon in the ribosomal P site

Experimental method

X-RAY DIFFRACTION

Resolution

3.64 Å

Loop

Sequence

CGUCAAG

Length

7 nucleotides

Bulged bases

8FON|1|YA|U|2797

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FON_211 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.3998

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

8FON|1|YA|C|2794
8FON|1|YA|G|2795
8FON|1|YA|U|2797
8FON|1|YA|C|2798
8FON|1|YA|A|2799
8FON|1|YA|A|2801
8FON|1|YA|G|2802

Current chains

Chain YA

23S rRNA

Nearby chains