HL_8FR8_009

3D structure

PDB id

8FR8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

AUGUGAUACCGGGUAGGGGUUGU

Length

23 nucleotides

Bulged bases

8FR8|1|A|U|285

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FR8|1|A|A|282
8FR8|1|A|U|283
8FR8|1|A|G|284
8FR8|1|A|U|285
8FR8|1|A|G|286
8FR8|1|A|A|287
8FR8|1|A|U|288
8FR8|1|A|A|289
8FR8|1|A|C|290
8FR8|1|A|C|291
8FR8|1|A|G|292
8FR8|1|A|G|293
8FR8|1|A|G|294
8FR8|1|A|U|295
8FR8|1|A|A|296
8FR8|1|A|G|297
8FR8|1|A|G|298
8FR8|1|A|G|299
8FR8|1|A|G|300
8FR8|1|A|U|301
8FR8|1|A|U|302
8FR8|1|A|G|303
8FR8|1|A|U|304

Current chains

Chain A

23S rRNA (3119-MER)

Nearby chains

Chain Q

50S ribosomal protein L9