HL_8FR8_044
3D structure
- PDB id
- 8FR8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- CAACACAG
- Length
- 8 nucleotides
- Bulged bases
- 8FR8|1|A|A|1832, 8FR8|1|A|A|1834, 8FR8|1|A|A|1836
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8FR8_044 not in the Motif Atlas
- Homologous match to HL_7RQB_040
- Geometric discrepancy: 0.1666
- The information below is about HL_7RQB_040
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_64430.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
8FR8|1|A|C|1830
8FR8|1|A|A|1831
8FR8|1|A|A|1832
8FR8|1|A|C|1833
8FR8|1|A|A|1834
8FR8|1|A|C|1835
8FR8|1|A|A|1836
8FR8|1|A|G|1837
Current chains
- Chain A
- 23S rRNA (3119-MER)
Nearby chains
- Chain 0
- 50S ribosomal protein L34
- Chain Y
- 50S ribosomal protein L22
Coloring options: