HL_8FR8_053
3D structure
- PDB id
- 8FR8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.76 Å
Loop
- Sequence
- GGUAAGUUC
- Length
- 9 nucleotides
- Bulged bases
- 8FR8|1|A|U|2179
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8FR8_053 not in the Motif Atlas
- Homologous match to HL_7RQB_049
- Geometric discrepancy: 0.0811
- The information below is about HL_7RQB_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_51824.1
- Basepair signature
- cWW-F-F-tSH-F-F
- Number of instances in this motif group
- 8
Unit IDs
8FR8|1|A|G|2173
8FR8|1|A|G|2174
8FR8|1|A|U|2175
8FR8|1|A|A|2176
8FR8|1|A|A|2177
8FR8|1|A|G|2178
8FR8|1|A|U|2179
8FR8|1|A|U|2180
8FR8|1|A|C|2181
Current chains
- Chain A
- 23S rRNA (3119-MER)
Nearby chains
- Chain U
- 50S ribosomal protein L14
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: