HL_8FR8_104

3D structure

PDB id

8FR8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.76 Å

Loop

Sequence

CGUUAUGG

Length

8 nucleotides

Bulged bases

8FR8|1|a|G|1120

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FR8_104 not in the Motif Atlas

Homologous match to HL_6CZR_097

Geometric discrepancy: 0.538

The information below is about HL_6CZR_097

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FR8|1|a|C|1114
8FR8|1|a|G|1115
8FR8|1|a|U|1116
8FR8|1|a|U|1117
8FR8|1|a|A|1118
8FR8|1|a|U|1119
8FR8|1|a|G|1120
8FR8|1|a|G|1121

Current chains

Chain a

16S rRNA (1511-MER)

Nearby chains