HL_8FZD_076

3D structure

PDB id

8FZD (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with apoRF3, RF1, P- and E-site tRNAPhe (Composite state I-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

8FZD|1|a|U|209

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FZD_076 not in the Motif Atlas

Geometric match to HL_3V7E_002

Geometric discrepancy: 0.3808

The information below is about HL_3V7E_002

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

8FZD|1|a|C|207
8FZD|1|a|U|208
8FZD|1|a|U|209
8FZD|1|a|C|210
8FZD|1|a|G|211
8FZD|1|a|G|212

Current chains

Chain a

16S Ribosomal RNA

Nearby chains