HL_8FZE_063

3D structure

PDB id

8FZE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State I-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CGAGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FZE_063 not in the Motif Atlas

Geometric match to HL_5B2P_001

Geometric discrepancy: 0.0753

The information below is about HL_5B2P_001

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

8FZE|1|A|C|2658
8FZE|1|A|G|2659
8FZE|1|A|A|2660
8FZE|1|A|G|2661
8FZE|1|A|A|2662
8FZE|1|A|G|2663

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain G

50S ribosomal protein L6