HL_8FZF_004
3D structure
- PDB id
- 8FZF (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an E. coli rotated ribosome complex bound with RF3-ppGpp and p/E-tRNAPhe (Composite state I-C)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUUCGA
- Length
- 6 nucleotides
- Bulged bases
- 8FZF|1|A|U|139
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8FZF_004 not in the Motif Atlas
- Geometric match to HL_6QN3_003
- Geometric discrepancy: 0.1827
- The information below is about HL_6QN3_003
- Detailed Annotation
- UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_34617.5
- Basepair signature
- cWW-tSW-F
- Number of instances in this motif group
- 57
Unit IDs
8FZF|1|A|U|137
8FZF|1|A|U|138
8FZF|1|A|U|139
8FZF|1|A|C|140
8FZF|1|A|G|141
8FZF|1|A|A|142
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain V
- 50S ribosomal protein L23
Coloring options: