HL_8FZG_004

3D structure

PDB id

8FZG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF3-GDPCP, RF1, P- and E-site tRNAPhe (Composite state II-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UUUCGA

Length

6 nucleotides

Bulged bases

8FZG|1|A|U|139

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FZG_004 not in the Motif Atlas

Geometric match to HL_6QN3_003

Geometric discrepancy: 0.2652

The information below is about HL_6QN3_003

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

60

Unit IDs

8FZG|1|A|U|137
8FZG|1|A|U|138
8FZG|1|A|U|139
8FZG|1|A|C|140
8FZG|1|A|G|141
8FZG|1|A|A|142

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain V

50S ribosomal protein L23