HL_8FZG_050

3D structure

PDB id

8FZG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF3-GDPCP, RF1, P- and E-site tRNAPhe (Composite state II-A)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGCCAG

Length

6 nucleotides

Bulged bases

8FZG|1|A|C|2145

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FZG_050 not in the Motif Atlas

Homologous match to HL_3U4M_001

Geometric discrepancy: 0.3861

The information below is about HL_3U4M_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

60

Unit IDs

8FZG|1|A|C|2143
8FZG|1|A|G|2144
8FZG|1|A|C|2145
8FZG|1|A|C|2146
8FZG|1|A|A|2147
8FZG|1|A|G|2148

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain k

30S ribosomal protein S11