HL_8FZH_025

3D structure

PDB id

8FZH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State II-D)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CAUCCCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FZH_025 not in the Motif Atlas

Homologous match to HL_7RQB_026

Geometric discrepancy: 0.4883

The information below is about HL_7RQB_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56241.1

Basepair signature

cWW-cSW-F

Number of instances in this motif group

15

Unit IDs

8FZH|1|A|C|885
8FZH|1|A|A|886
8FZH|1|A|U|887
8FZH|1|A|C|888
8FZH|1|A|C|889
8FZH|1|A|C|890
8FZH|1|A|G|891

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain m

30S ribosomal protein S13