HL_8FZI_021

3D structure

PDB id

8FZI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGGUAACACU

Length

10 nucleotides

Bulged bases

8FZI|1|A|A|715, 8FZI|1|A|A|716

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FZI|1|A|G|711
8FZI|1|A|G|712
8FZI|1|A|G|713
8FZI|1|A|U|714
8FZI|1|A|A|715
8FZI|1|A|A|716
8FZI|1|A|C|717
8FZI|1|A|A|718
8FZI|1|A|C|719
8FZI|1|A|U|720

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain a

Small subunit ribosomal RNA; SSU rRNA

Chain o

30S ribosomal protein S15