HL_8FZI_025

3D structure

PDB id

8FZI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAUCCCG

Length

7 nucleotides

Bulged bases

8FZI|1|A|C|888

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8FZI_025 not in the Motif Atlas

Homologous match to HL_5J7L_158

Geometric discrepancy: 0.5331

The information below is about HL_5J7L_158

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8FZI|1|A|C|885
8FZI|1|A|A|886
8FZI|1|A|U|887
8FZI|1|A|C|888
8FZI|1|A|C|889
8FZI|1|A|C|890
8FZI|1|A|G|891

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain s

30S ribosomal protein S19