HL_8G34_060

3D structure

PDB id

8G34 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:1st intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G34_060 not in the Motif Atlas

Homologous match to HL_4WF9_054

Geometric discrepancy: 0.0884

The information below is about HL_4WF9_054

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

8G34|1|B|C|2374
8G34|1|B|G|2375
8G34|1|B|A|2376
8G34|1|B|A|2377
8G34|1|B|A|2378
8G34|1|B|G|2379

Current chains

Chain B

23S

Nearby chains

Chain 1

50S ribosomal protein L33

Chain O

50S ribosomal protein L18

Chain W

50S ribosomal protein L27