HL_8G34_069

3D structure

PDB id

8G34 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:1st intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUUUAAG

Length

7 nucleotides

Bulged bases

8G34|1|B|U|2797, 8G34|1|B|A|2799

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G34_069 not in the Motif Atlas

Homologous match to HL_5J7L_200

Geometric discrepancy: 0.4226

The information below is about HL_5J7L_200

Detailed Annotation

UNCG variation

Broad Annotation

UNCG variation

Motif group

HL_08100.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

4

Unit IDs

8G34|1|B|C|2795
8G34|1|B|U|2796
8G34|1|B|U|2797
8G34|1|B|U|2798
8G34|1|B|A|2799
8G34|1|B|A|2800
8G34|1|B|G|2801

Current chains

Chain B

23S

Nearby chains

Chain J

50S ribosomal protein L13