HL_8G34_083

3D structure

PDB id

8G34 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:1st intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

8G34|1|v|U|467

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G34_083 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.1879

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

8G34|1|v|G|462
8G34|1|v|U|463
8G34|1|v|U|464
8G34|1|v|A|465
8G34|1|v|A|466
8G34|1|v|U|467
8G34|1|v|A|468
8G34|1|v|C|469
8G34|1|v|C|470

Current chains

Chain v

16S

Nearby chains