HL_8G38_006

3D structure

PDB id

8G38 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd Intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UUUCGA

Length

6 nucleotides

Bulged bases

8G38|1|B|U|139

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G38_006 not in the Motif Atlas

Geometric match to HL_6SY6_001

Geometric discrepancy: 0.1702

The information below is about HL_6SY6_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

60

Unit IDs

8G38|1|B|U|137
8G38|1|B|U|138
8G38|1|B|U|139
8G38|1|B|C|140
8G38|1|B|G|141
8G38|1|B|A|142

Current chains

Chain B

23S

Nearby chains

Chain T

50S ribosomal protein L23