HL_8G38_023

3D structure

PDB id

8G38 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd Intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGUAACAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G38_023 not in the Motif Atlas

Homologous match to HL_5J7L_154

Geometric discrepancy: 0.2597

The information below is about HL_5J7L_154

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

8G38|1|B|G|712
8G38|1|B|G|713
8G38|1|B|U|714
8G38|1|B|A|715
8G38|1|B|A|716
8G38|1|B|C|717
8G38|1|B|A|718
8G38|1|B|C|719

Current chains

Chain B

23S

Nearby chains

Chain n

30S ribosomal protein S15

Chain v

Small subunit ribosomal RNA; SSU rRNA