HL_8G38_031

3D structure

PDB id

8G38 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd Intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGUAAUAG

Length

8 nucleotides

Bulged bases

8G38|1|B|A|1095

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G38_031 not in the Motif Atlas

Geometric match to HL_361D_002

Geometric discrepancy: 0.258

The information below is about HL_361D_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.3

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

8G38|1|B|C|1092
8G38|1|B|G|1093
8G38|1|B|U|1094
8G38|1|B|A|1095
8G38|1|B|A|1096
8G38|1|B|U|1097
8G38|1|B|A|1098
8G38|1|B|G|1099

Current chains

Chain B

23S

Nearby chains

Chain 6

GTPase HflX

Chain G

50S ribosomal protein L6