HL_8G38_057

3D structure

PDB id

8G38 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd Intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGUCGGACAUC

Length

11 nucleotides

Bulged bases

8G38|1|B|C|2306

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G38_057 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.3047

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.1

Basepair signature

cWW-cWW

Number of instances in this motif group

2

Unit IDs

8G38|1|B|G|2303
8G38|1|B|G|2304
8G38|1|B|U|2305
8G38|1|B|C|2306
8G38|1|B|G|2307
8G38|1|B|G|2308
8G38|1|B|A|2309
8G38|1|B|C|2310
8G38|1|B|A|2311
8G38|1|B|U|2312
8G38|1|B|C|2313

Current chains

Chain B

23S

Nearby chains

Chain F

50S ribosomal protein L5