HL_8G38_074

3D structure

PDB id

8G38 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd Intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUGGAAACGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G38_074 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.2143

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.3

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

8G38|1|v|C|156
8G38|1|v|U|157
8G38|1|v|G|158
8G38|1|v|G|159
8G38|1|v|A|160
8G38|1|v|A|161
8G38|1|v|A|162
8G38|1|v|C|163
8G38|1|v|G|164
8G38|1|v|G|165

Current chains

Chain v

16S

Nearby chains

Chain P

50S ribosomal protein L19

Chain s

30S ribosomal protein S20