HL_8G38_085
3D structure
- PDB id
- 8G38 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd Intermediate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GCUCAAC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8G38_085 not in the Motif Atlas
- Homologous match to HL_4LFB_014
- Geometric discrepancy: 0.1609
- The information below is about HL_4LFB_014
- Detailed Annotation
- GNRA-like with tWH
- Broad Annotation
- GNRA
- Motif group
- HL_92337.1
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
8G38|1|v|G|617
8G38|1|v|C|618
8G38|1|v|U|619
8G38|1|v|C|620
8G38|1|v|A|621
8G38|1|v|A|622
8G38|1|v|C|623
Current chains
- Chain v
- 16S
Nearby chains
- Chain c
- 30S ribosomal protein S4
- Chain o
- 30S ribosomal protein S16
Coloring options: