HL_8G38_096

3D structure

PDB id

8G38 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd Intermediate

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GUCCGGC

Length

7 nucleotides

Bulged bases

8G38|1|v|C|1137, 8G38|1|v|G|1139

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G38_096 not in the Motif Atlas

Homologous match to HL_5J7L_025

Geometric discrepancy: 0.5204

The information below is about HL_5J7L_025

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87954.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

7

Unit IDs

8G38|1|v|G|1134
8G38|1|v|U|1135
8G38|1|v|C|1136
8G38|1|v|C|1137
8G38|1|v|G|1138
8G38|1|v|G|1139
8G38|1|v|C|1140

Current chains

Chain v

16S

Nearby chains

Chain h

30S ribosomal protein S9