HL_8G5Z_099

3D structure

PDB id

8G5Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.64 Å

Loop

Sequence

CAU(OMC)CAAGG(A2M)AG

Length

12 nucleotides

Bulged bases

8G5Z|1|S2|A|464

QA status

Modified nucleotides: OMC, A2M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G5Z|1|S2|C|459
8G5Z|1|S2|A|460
8G5Z|1|S2|U|461
8G5Z|1|S2|OMC|462
8G5Z|1|S2|C|463
8G5Z|1|S2|A|464
8G5Z|1|S2|A|465
8G5Z|1|S2|G|466
8G5Z|1|S2|G|467
8G5Z|1|S2|A2M|468
8G5Z|1|S2|A|469
8G5Z|1|S2|G|470

Current chains

Chain S2

18S rRNA

Nearby chains

Chain EF

Elongation factor 1-alpha 1

Chain LV

60S ribosomal protein L23

Chain SG

40S ribosomal protein S6