HL_8G5Z_122

3D structure

PDB id

8G5Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.64 Å

Loop

Sequence

CGGGGUGCCCUG

Length

12 nucleotides

Bulged bases

8G5Z|1|S2|U|1761, 8G5Z|1|S2|C|1773

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G5Z|1|S2|C|1756
8G5Z|1|S2|G|1757
8G5Z|1|S2|G|1758
8G5Z|1|S2|G|1759
8G5Z|1|S2|G|1760
8G5Z|1|S2|U|1761
8G5Z|1|S2|G|1771
8G5Z|1|S2|C|1772
8G5Z|1|S2|C|1773
8G5Z|1|S2|C|1774
8G5Z|1|S2|U|1775
8G5Z|1|S2|G|1776

Current chains

Chain S2

18S rRNA

Nearby chains

Chain LW

eL24

Chain SG

40S ribosomal protein S6