HL_8G60_002
3D structure
- PDB id
- 8G60 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.54 Å
Loop
- Sequence
- GA(PSU)UGAA(MIA)A(PSU)C
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8G60_002 not in the Motif Atlas
- Geometric match to HL_4YAZ_004
- Geometric discrepancy: 0.2619
- The information below is about HL_4YAZ_004
- Detailed Annotation
- Mini UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_90436.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 37
Unit IDs
8G60|1|At|G|30
8G60|1|At|A|31
8G60|1|At|PSU|32
8G60|1|At|U|33
8G60|1|At|G|34
8G60|1|At|A|35
8G60|1|At|A|36
8G60|1|At|MIA|37
8G60|1|At|A|38
8G60|1|At|PSU|39
8G60|1|At|C|40
Current chains
- Chain At
- A-site tRNA
Nearby chains
- Chain L5
- Large subunit ribosomal RNA; LSU rRNA
- Chain S2
- Small subunit ribosomal RNA; SSU rRNA
- Chain SP
- uS19
- Chain Se
- eS30
- Chain mR
- mRNA
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