HL_8G60_013

3D structure

PDB id

8G60 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

CGUAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G60_013 not in the Motif Atlas

Homologous match to HL_8C3A_010

Geometric discrepancy: 0.0823

The information below is about HL_8C3A_010

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

360

Unit IDs

8G60|1|L5|C|368
8G60|1|L5|G|369
8G60|1|L5|U|370
8G60|1|L5|A|371
8G60|1|L5|A|372
8G60|1|L5|G|373

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LC

uL4

Chain Lj

eL37

Chain Ll

eL39