HL_8G60_019
3D structure
- PDB id
- 8G60 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.54 Å
Loop
- Sequence
- UGAAGG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8G60_019 not in the Motif Atlas
- Homologous match to HL_8C3A_016
- Geometric discrepancy: 0.063
- The information below is about HL_8C3A_016
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.2
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 360
Unit IDs
8G60|1|L5|U|1389
8G60|1|L5|G|1390
8G60|1|L5|A|1391
8G60|1|L5|A|1392
8G60|1|L5|G|1393
8G60|1|L5|G|1394
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LL
- eL13
- Chain LQ
- eL18
- Chain La
- uL15
- Chain Li
- eL36
Coloring options: