HL_8G60_031

3D structure

PDB id

8G60 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

CCAUGGAAGUCGG

Length

13 nucleotides

Bulged bases

8G60|1|L5|A|1984

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G60|1|L5|C|1977
8G60|1|L5|C|1978
8G60|1|L5|A|1979
8G60|1|L5|U|1980
8G60|1|L5|G|1981
8G60|1|L5|G|1982
8G60|1|L5|A|1983
8G60|1|L5|A|1984
8G60|1|L5|G|1985
8G60|1|L5|U|1986
8G60|1|L5|C|1987
8G60|1|L5|G|1988
8G60|1|L5|G|1989

Current chains

Chain L5

28S rRNA

Nearby chains

Chain At

Transfer RNA; tRNA

Chain LI

uL16

Chain LK

uL11