HL_8G60_044

3D structure

PDB id

8G60 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

GUUCGCC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G60_044 not in the Motif Atlas

Geometric match to HL_5U3G_001

Geometric discrepancy: 0.3179

The information below is about HL_5U3G_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

8G60|1|L5|G|2664
8G60|1|L5|U|2665
8G60|1|L5|U|2666
8G60|1|L5|C|2667
8G60|1|L5|G|2668
8G60|1|L5|C|2669
8G60|1|L5|C|2670

Current chains

Chain L5

28S rRNA

Nearby chains

Chain LR

eL19

Chain Lp

eL43