HL_8G60_117

3D structure

PDB id

8G60 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (CR state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.54 Å

Loop

Sequence

GAUUGCAAUUAU(PSU)C

Length

14 nucleotides

Bulged bases

8G60|1|S2|A|1623

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8G60|1|S2|G|1613
8G60|1|S2|A|1614
8G60|1|S2|U|1615
8G60|1|S2|U|1616
8G60|1|S2|G|1617
8G60|1|S2|C|1618
8G60|1|S2|A|1619
8G60|1|S2|A|1620
8G60|1|S2|U|1621
8G60|1|S2|U|1622
8G60|1|S2|A|1623
8G60|1|S2|U|1624
8G60|1|S2|PSU|1625
8G60|1|S2|C|1626

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SP

uS19

Chain SS

uS13

Chain ST

eS19

Chain Sd

uS14